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A gitignore-mode project only ignored .ai/. CLAUDE.md was left untracked but not ignored, so an accidental git add or a codify run could still commit a personal CLAUDE.md, the private rule copies under .claude/, or an AGENTS.md. install-ai now ignores the whole set (.ai/, .claude/, CLAUDE.md, AGENTS.md) at bootstrap, line-idempotent so an existing .gitignore isn't duplicated.
.claude/ goes in the set because it's rulesets-owned (copies of claude-rules/*.md plus the language bundle's rules, hooks, and settings), re-synced from rulesets every startup, so git isn't how it travels. Ignoring it also keeps those private rule copies out of the repo, which ignoring CLAUDE.md alone would miss. The gate is unchanged: track-mode projects (personal/doc repos, team repos sharing config) keep tracking the set.
sweep-gitignore-tooling.sh backfills the set across existing gitignore-mode projects, idempotent and skipping track-mode by design. It warns when a now-ignored path is already tracked, since the ignore won't untrack it. protocols.org states the policy once.
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install-ai now creates a top-level inbox/ with a .gitkeep in every project it bootstraps. inbox-send treats a project as a messaging target only when it has both a .ai/ marker and a top-level inbox/, so before this a freshly bootstrapped project couldn't receive cross-project handoffs until the inbox was made by hand.
The directory is created in both track and gitignore modes, since inbox/ is a project-root convention independent of whether .ai/ is tracked. The step is idempotent, so a project that already has an inbox keeps its contents.
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The `[ ] && echo` shortcut propagates the test's exit status out of the
while loop, which can muddy the pipeline's overall exit. The `if` form
keeps the loop body's status decoupled from the filter check.
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scripts/install-ai.sh copies canonical .ai/ content from claude-templates/ into a fresh project. Rsyncs protocols.org, workflows/, scripts/, someday-maybe.org as-is; templates notes.org with project-name and date placeholders substituted; creates empty sessions/, references/, retrospectives/ dirs.
Two tracking modes: TRACK=1 adds .gitkeep files inside otherwise-empty dirs so they survive in git history; GITIGNORE=1 appends .ai/ to the project's .gitignore so session records stay local. Prompts interactively if neither flag is set.
Refuses if PROJECT/.ai/ already exists with a message pointing to `make audit APPLY=1` for sync of existing installs. Without a PROJECT argument, fzf-picks from ~/code/* + ~/projects/* git checkouts that don't already have .ai/.
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